PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON64301.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family HD-ZIP
Protein Properties Length: 717aa    MW: 79432 Da    PI: 6.1812
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON64301.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox51.91.3e-1665117456
                 -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox   4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                  +++t++q++ +e++F++++ p+ ++++eL+++lgLt  qVk+WFqN+R + k
  PON64301.1  65 NRRHTRHQIQKMEAFFKECPLPNDKQKKELSRELGLTPLQVKFWFQNKRNQIK 117
                 5689*********************************************8876 PP
2START216.21.1e-672464661206
                 HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEEC CS
       START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevis 86 
                 ela +a++el+ +a+ +ep+W++s       +n++e++++f+++ +     ++ ea+r+  vv+m++ +lve+l+d++ qW++ +     +a+tlev+s
  PON64301.1 246 ELAIAAMEELIMMAQMGEPLWMTSLdgasVVLNEEEYIRTFPRETGpkaagFKCEASREASVVIMNTINLVEILMDVS-QWSTIFSgvvsRAMTLEVLS 343
                 57899********************999999**********99888********************************.******************** PP

                 TT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXH CS
       START  87 sg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlph 178
                 +g      ga q+m+ae q++splvp R+++fvRy++q+ +g+w++vdvS+d+ ++ p     vR++++pSg+l+++++nghskvtwvehv+++ r +h
  PON64301.1 344 TGvsgnfnGAMQVMTAEIQVPSPLVPtRESYFVRYCKQHADGTWAVVDVSLDNLRPSPA----VRCRRRPSGCLFQEMPNGHSKVTWVEHVEVDYRDVH 438
                 ********************************************************995....************************************ PP

                 HHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
       START 179 wllrslvksglaegaktwvatlqrqcek 206
                 +l+++lv+sg+a+gak+wvatl+rqce+
  PON64301.1 439 NLYKQLVNSGHAFGAKRWVATLDRQCER 466
                 **************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 717 aa     Download sequence    
MIQPNIMEGG HQLHHPLYMT AQNTTSESDL NIRLGRYDNV FDSENQKGGS SSDDQDQQVP  60
KKRFNRRHTR HQIQKMEAFF KECPLPNDKQ KKELSRELGL TPLQVKFWFQ NKRNQIKTQH  120
ERHENIQLRT ENEKLSADNV RYREALSRHS LCPNCGGPTP TIGEMSFYEH NLRVENARLR  180
EEIDLNSAIA AENMGNPVVN PLLSSTVPPR PVQLGPPAGM GGEMYGGATG DLLSEPNEAD  240
KNIIIELAIA AMEELIMMAQ MGEPLWMTSL DGASVVLNEE EYIRTFPRET GPKAAGFKCE  300
ASREASVVIM NTINLVEILM DVSQWSTIFS GVVSRAMTLE VLSTGVSGNF NGAMQVMTAE  360
IQVPSPLVPT RESYFVRYCK QHADGTWAVV DVSLDNLRPS PAVRCRRRPS GCLFQEMPNG  420
HSKVTWVEHV EVDYRDVHNL YKQLVNSGHA FGAKRWVATL DRQCERLASA TATNIQTGDI  480
GVTTNQDGRK SMLKLSERMV ISFYAGVSAS TTHTWTTISG TETDNIRIMT RKSMDDPGTP  540
PGIVLNVATS FWLPIPPKRV FDFLREENSR SEWDILSNGG VVQEMTHIAN GRDTGNCLSL  600
LRINSDNSFQ SKTLILQESC TDQTASFVIY APVDTVAMNV VLNGGDPDKV ALLPSGFAIL  660
HNSDRGIPGG SLLTVAFQIL VDSVPTAKLS LGSVATVNNL IAWTVERIKA SLSCDNA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05230.40.0HD-ZIP family protein