PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON64332.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NF-YB

Protein Properties

Length: 175aa MW: 18894 Da PI: 6.1225

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON64332.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	184.7	7e-58	27	124	1	98
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegekk 98 vreqdr+lPian+srimkk+lPan+ki+kdak+tvqecvsefisf+tseasdkcq+ekrktingddllwa+atlGfedy+eplk+yl++yreleg++k PON64332.1 27 VREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKAYLSRYRELEGDTK 124 69*********************************************************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 175 aa Download sequence
MAEAPTSPAG GSHESGGEQS PHAGGGVREQ DRYLPIANIS RIMKKALPAN GKIAKDAKDT 60 VQECVSEFIS FITSEASDKC QKEKRKTING DDLLWAMATL GFEDYIEPLK AYLSRYRELE 120 GDTKGSARGG DSSAKRDGVG AAPGQNPQFV HQGSLSYINS QERMHQITEG SLVTY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37060.1	1e-84	NF-YB family protein