PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON64526.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 395aa MW: 44047.4 Da PI: 9.9118

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON64526.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.6	1.1e-16	124	169	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+q+G+ +W++Ia+ + gR++k+c++rw++ PON64526.1 124 RGHWRPAEDAKLKELVAQYGPQNWNLIAENLE-GRSGKSCRLRWFNQ 169 899***************************.*********996 PP
2	Myb_DNA-binding	54.7	2.3e-17	176	219	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++++eE+e+l+ a++++G++ W+ I+r ++ gRt++ +k++w+ PON64526.1 176 RRAFSEEEEERLLAAHRLYGNK-WAMISRLFP-GRTDNAVKNHWHV 219 678*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence
MGFQSQMNLQ HLKSEFNGLN GYNNMNFLPT PNPNPAPALA LAPQLSLSKT FEGESRSCEM 60 GLQILNSSSE ETKKTWVFPE KNKKISDLSN MSVFDKKGLS FELVEEEPEG GKSRKNGHTK 120 LCARGHWRPA EDAKLKELVA QYGPQNWNLI AENLEGRSGK SCRLRWFNQL DPRINRRAFS 180 EEEEERLLAA HRLYGNKWAM ISRLFPGRTD NAVKNHWHVI MARKHREQSN VYKRRRPSSS 240 SSQILPKVID NMTLPNNNNA SSTESTISNT INDESVSTCT DLSLTPSSTR SAPPGFLTKF 300 KPSTQQESQI GLKNGSFDKL IGLYRVGQRG GVSKIVVKLD QCGQSDSNSE NSAADSVGTN 360 RSINLTMSSG TNQNGKEEKI ISNFRFIDFL GVGAT

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence

MGFQSQMNLQ HLKSEFNGLN GYNNMNFLPT PNPNPAPALA LAPQLSLSKT FEGESRSCEM  60
GLQILNSSSE ETKKTWVFPE KNKKISDLSN MSVFDKKGLS FELVEEEPEG GKSRKNGHTK  120
LCARGHWRPA EDAKLKELVA QYGPQNWNLI AENLEGRSGK SCRLRWFNQL DPRINRRAFS  180
EEEEERLLAA HRLYGNKWAM ISRLFPGRTD NAVKNHWHVI MARKHREQSN VYKRRRPSSS  240
SSQILPKVID NMTLPNNNNA SSTESTISNT INDESVSTCT DLSLTPSSTR SAPPGFLTKF  300
KPSTQQESQI GLKNGSFDKL IGLYRVGQRG GVSKIVVKLD QCGQSDSNSE NSAADSVGTN  360
RSINLTMSSG TNQNGKEEKI ISNFRFIDFL GVGAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	2e-67	MYB family protein