PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON64922.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

WRKY

Protein Properties

Length: 479aa MW: 53304.2 Da PI: 6.6497

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON64922.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	106.2	1.6e-33	276	334	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+s++prsYYrCtsa C vkk+vers++dp++v++tYeg+H+h+ PON64922.1 276 LDDGYRWRKYGQKAVKNSPYPRSYYRCTSAACGVKKRVERSSDDPNIVVTTYEGQHTHP 334 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 479 aa Download sequence
MMVSMDKKDQ AKERENSIMA NSATSTSASI FSSDDFNPTN FSSLFDTHNT NYNNYYYYTS 60 NNSTIVMPPP PPPPYITTST SNTQNHHEEA EKAPSSSALG FMDLLGISQD FGSSLFDLPP 120 LPPSPPPPPP PPPPPSINNK DDMMRTVVPV LPPRQTTPSS SPPLPSPASS TVLPEISTTS 180 EVLNGTTAPT TPNSSSLSSS SNDERQQKLL QVNANPDHEH QEEEEEAEQD PDRKAQNHND 240 DNNNNNNKQL KPKKKNQKRQ REPRFAFMTK SEVDHLDDGY RWRKYGQKAV KNSPYPRSYY 300 RCTSAACGVK KRVERSSDDP NIVVTTYEGQ HTHPCPVTPR GAIGISPSAA VESGAFVSHF 360 GGAMPLLSSA QQHHNQFHHH QQQQQYHHQQ QQQQHYQHQH QHHSPYMYNS STPSLSVSNT 420 STNGGLLPSF VQERSHNYGN YNNVAVTSSS ASSSLVMRDH GLLQDIVPTQ IRKEEDQID

Sequence ? help Back to Top

Protein Sequence Length: 479 aa Download sequence

MMVSMDKKDQ AKERENSIMA NSATSTSASI FSSDDFNPTN FSSLFDTHNT NYNNYYYYTS  60
NNSTIVMPPP PPPPYITTST SNTQNHHEEA EKAPSSSALG FMDLLGISQD FGSSLFDLPP  120
LPPSPPPPPP PPPPPSINNK DDMMRTVVPV LPPRQTTPSS SPPLPSPASS TVLPEISTTS  180
EVLNGTTAPT TPNSSSLSSS SNDERQQKLL QVNANPDHEH QEEEEEAEQD PDRKAQNHND  240
DNNNNNNKQL KPKKKNQKRQ REPRFAFMTK SEVDHLDDGY RWRKYGQKAV KNSPYPRSYY  300
RCTSAACGVK KRVERSSDDP NIVVTTYEGQ HTHPCPVTPR GAIGISPSAA VESGAFVSHF  360
GGAMPLLSSA QQHHNQFHHH QQQQQYHHQQ QQQQHYQHQH QHHSPYMYNS STPSLSVSNT  420
STNGGLLPSF VQERSHNYGN YNNVAVTSSS ASSSLVMRDH GLLQDIVPTQ IRKEEDQID

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49520.1	3e-49	WRKY family protein