PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON64979.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family bHLH
Protein Properties Length: 236aa    MW: 26129.8 Da    PI: 6.7991
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON64979.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.52.8e-0981127554
                 HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 +  rE+ RR+++N++f eL ++l +    + +K++Ka iL  +v+ + +L
  PON64979.1  81 KACREKMRREKLNDRFLELGSILDPG---RPPKMDKAVILGDVVRMVTQL 127
                 678**********************8...89*************999888 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MGSGGNPNWV FDYSLIEDLG VPGGDLPSLE PPGFTWPSHS FTAQTDLSVE FDESFANDDV  60
LKETGSRKRV RPGSCSASGS KACREKMRRE KLNDRFLELG SILDPGRPPK MDKAVILGDV  120
VRMVTQLRKE SQKLKESNES LQEKINELKV EKNELRDEKQ RLKAEKDILD KQVKALTTQP  180
SFMHPPAIPA PFSSPGQVVG GKLVPFVGYP GISMWQFMPP ATVDTSQDHV LRPPVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.12e-88bHLH family protein