PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON65022.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

WRKY

Protein Properties

Length: 351aa MW: 38045.9 Da PI: 9.8417

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON65022.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	98.1	5.6e-31	279	336	3	59
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D+++WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +dp ++++tYeg+Hnh+ PON65022.1 279 DEFSWRKYGQKPIKGSPHPRGYYKCSSLrGCPARKHVERALDDPAMLIVTYEGDHNHS 336 99**********************998**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MAVELMMGYE IDSSFSSDNM EENSVKEAAS AGIQSVEKFL RLISHHSHDH DRQEVADLAV 60 NKFKRVISLL DRGRTGHARF RRAPMAPLSS SSSPAPVMQD TRGQDPPGSS APEPNLHPKP 120 EQGSAFKVYC PTPLLRLPPL PQNQNQVVQS RHSHGGALVP RNGSLEKKDA TTTTINFSAS 180 PSISAANSFM SSLTGDTDNS VPPSLSSGFQ LTNLSQSSSG KPPLSSSSFK RKCSSVDDAA 240 LRCGSSSGRC HCSKKRKSKV KRVVRVPAIS MKMADIPPDE FSWRKYGQKP IKGSPHPRGY 300 YKCSSLRGCP ARKHVERALD DPAMLIVTYE GDHNHSHSVT EATAALVLES S

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MAVELMMGYE IDSSFSSDNM EENSVKEAAS AGIQSVEKFL RLISHHSHDH DRQEVADLAV  60
NKFKRVISLL DRGRTGHARF RRAPMAPLSS SSSPAPVMQD TRGQDPPGSS APEPNLHPKP  120
EQGSAFKVYC PTPLLRLPPL PQNQNQVVQS RHSHGGALVP RNGSLEKKDA TTTTINFSAS  180
PSISAANSFM SSLTGDTDNS VPPSLSSGFQ LTNLSQSSSG KPPLSSSSFK RKCSSVDDAA  240
LRCGSSSGRC HCSKKRKSKV KRVVRVPAIS MKMADIPPDE FSWRKYGQKP IKGSPHPRGY  300
YKCSSLRGCP ARKHVERALD DPAMLIVTYE GDHNHSHSVT EATAALVLES S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24240.1	1e-72	WRKY family protein