PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON65106.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 343aa    MW: 38178.6 Da    PI: 5.1842
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON65106.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.11.3e-19185235255
         AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+++AeIrdp   + k  r++lg+f ta eAaka+++a+ kl+g
  PON65106.1 185 HYRGVRQRP-WGKFAAEIRDP---NrKGSRVWLGTFETAIEAAKAYDRAAFKLRG 235
                 7********.**********9...6566*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    
MASIDEVSAS KLRLIKQHLL GDLSSPLGNN FSVDLPTRNE WSSDPSRACS TSQSDSIEIS  60
DYLDSSSGEL FEFCTGQIST QTDFDLSGFE PKTLNLTDNY NNFIDDIDNS FEFESKPQIS  120
ESSSSSFEFK SKPQTAPTKS TDSSSSSPSS RKRSLTISLP AKTQTQWIQF GAPKPPVVVE  180
GEKRHYRGVR QRPWGKFAAE IRDPNRKGSR VWLGTFETAI EAAKAYDRAA FKLRGSKAIL  240
NFPLEAGKCE KDIVVKTDEV KRRRQEEDEE GAEVKPVLTE KKVKLTEAED TSSNTLSYLK  300
DIPLTPSNWT AVWDSDYKGI FSVPPLSPLS PHPPFGFPQL MVV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47230.11e-48ERF family protein