PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON65355.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

Protein Properties

Length: 787aa MW: 88377.9 Da PI: 5.9628

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON65355.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	65	1.2e-20	638	735	2	96
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EE CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvv 94 +kvl++sdv+++gr+vlpkk ae+h +++ + ++ + +ed ++r+W+++++y ++ks++y+l+ ++ +Fv+angL+egDf+v++ ++ +++++++ PON65355.1 638 QKVLKQSDVGSLGRIVLPKKEAETHlpELEARDGISIPMEDiGTSRVWNMRYRYwpNNKSRMYLLE-NTGDFVRANGLQEGDFIVIY--SDiKCGKYMI 733 79***********************999999****7778*****777777777777.******************..6779998887 PP EE CS B3 95 kv 96 + PON65355.1 734 RG 735 65 PP

Sequence ? help Back to Top
Protein Sequence Length: 787 aa Download sequence
MKSSVDTQGQ DLVHAGEDIK RENPTAFGVM DHQEEEIWLE NDQDQDHDHQ DLLDVNEASI 60 FYSEFPPLPD FPCMSSSSSS SSSSTPAPVK AINCSSSSSS ASSSSSAASW AVLKSDAEED 120 VDKNHHRHHH QNPYNNKQNE TETTPAALSS TASMDFSEQP GGPEGHTGID CMDMMETFGY 180 MDLLETNEFF DPSSIFQNDS VVDNNFQQEL LVPQEELIDQ HEELMIVKDS QNDEMMMLIE 240 NDDQEEEEEE DNSINNKEQD DMAMVFLEWL RSNRETVSAE DLRSVKIKKS TIESAARRLG 300 GGKEAMKQLL KLVLEWVQKN HLQKRRLKET SPFRGNTGVS NNQYEYQYQD PNQNPKPNNN 360 LSPNAFTHDQ SNNPCFSHSP WTTYEPATMV APSAYPSPMV GLMGVDPFTN GSGSNTTSNL 420 YTPTEYNTNN MLDSVQTWPP SQFALASPYT PFPDSNSLQI TTPSPHAQAF AGYGAQYPYQ 480 YYHHQDAGDQ RLMRLGSSAT KEARKKRMAR QRRLLSHHRH QHHHNHNHSH HHNHHQNQSH 540 VDHVQHARLN GSSTDNSCTS IAPAQPSPGS WVYWPQAAAA ASGVHSPAPL IPGIAAEVPP 600 LQPVDRTQTQ AQSSYQGRTS SEKRQGWKPE KNLRFLLQKV LKQSDVGSLG RIVLPKKEAE 660 THLPELEARD GISIPMEDIG TSRVWNMRYR YWPNNKSRMY LLENTGDFVR ANGLQEGDFI 720 VIYSDIKCGK YMIRGVKVRQ QGPKSENKRP GKSQRNQHTS SSAGANNNTD NCNNNGSSSS 780 SITQRKQ

Sequence ? help Back to Top

Protein Sequence Length: 787 aa Download sequence

MKSSVDTQGQ DLVHAGEDIK RENPTAFGVM DHQEEEIWLE NDQDQDHDHQ DLLDVNEASI  60
FYSEFPPLPD FPCMSSSSSS SSSSTPAPVK AINCSSSSSS ASSSSSAASW AVLKSDAEED  120
VDKNHHRHHH QNPYNNKQNE TETTPAALSS TASMDFSEQP GGPEGHTGID CMDMMETFGY  180
MDLLETNEFF DPSSIFQNDS VVDNNFQQEL LVPQEELIDQ HEELMIVKDS QNDEMMMLIE  240
NDDQEEEEEE DNSINNKEQD DMAMVFLEWL RSNRETVSAE DLRSVKIKKS TIESAARRLG  300
GGKEAMKQLL KLVLEWVQKN HLQKRRLKET SPFRGNTGVS NNQYEYQYQD PNQNPKPNNN  360
LSPNAFTHDQ SNNPCFSHSP WTTYEPATMV APSAYPSPMV GLMGVDPFTN GSGSNTTSNL  420
YTPTEYNTNN MLDSVQTWPP SQFALASPYT PFPDSNSLQI TTPSPHAQAF AGYGAQYPYQ  480
YYHHQDAGDQ RLMRLGSSAT KEARKKRMAR QRRLLSHHRH QHHHNHNHSH HHNHHQNQSH  540
VDHVQHARLN GSSTDNSCTS IAPAQPSPGS WVYWPQAAAA ASGVHSPAPL IPGIAAEVPP  600
LQPVDRTQTQ AQSSYQGRTS SEKRQGWKPE KNLRFLLQKV LKQSDVGSLG RIVLPKKEAE  660
THLPELEARD GISIPMEDIG TSRVWNMRYR YWPNNKSRMY LLENTGDFVR ANGLQEGDFI  720
VIYSDIKCGK YMIRGVKVRQ QGPKSENKRP GKSQRNQHTS SSAGANNNTD NCNNNGSSSS  780
SITQRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24650.1	1e-82	B3 family protein