PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON65564.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

bHLH

Protein Properties

Length: 435aa MW: 47064.3 Da PI: 5.4919

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON65564.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	31.1	4.3e-10	274	322	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+el+P + +k Ka +L + ++Y++sLq PON65564.1 274 NSHSLAERVRREKISERMRLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 322 58************************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 435 aa Download sequence
MSGQENEDVE FQHRSEGFLT CPSSGMSTNT LPEKASGMMM SSLSMFRPSN GQDPFFGSGW 60 DPLVSLSQSE NLGGSSMVSH GEFCNPPYPV VLENQGMSSS SQLVQYPSDS NFVEMVPKFP 120 CFGNGGFTEM VGSFGLPQCA EIASTGCPSN YTLNKEKGSE RTSTIGGQSQ DGCQNSDGGM 180 GSSPNGKRRK RAPDSSSPLR PDKNAEGEQQ KDLSGENSDV RKEHDEKKPK MEETTSGNMR 240 SKQTGKQAKE NSNSGDTAKE NYIHVRARRG QATNSHSLAE RVRREKISER MRLLQELVPG 300 CNKITGKAVM LDEIINYVQS LQQQVEFLSM KLASVNPELN IDIERILSKD ASQILNSRGG 360 NGAIFGLGPG IGSSQHYPPG IFQGTMPSLP STAPQFASLP QTVLENELQG LFHMGFDSTT 420 AIDNIGPNGH LKSEL

Sequence ? help Back to Top

Protein Sequence Length: 435 aa Download sequence

MSGQENEDVE FQHRSEGFLT CPSSGMSTNT LPEKASGMMM SSLSMFRPSN GQDPFFGSGW  60
DPLVSLSQSE NLGGSSMVSH GEFCNPPYPV VLENQGMSSS SQLVQYPSDS NFVEMVPKFP  120
CFGNGGFTEM VGSFGLPQCA EIASTGCPSN YTLNKEKGSE RTSTIGGQSQ DGCQNSDGGM  180
GSSPNGKRRK RAPDSSSPLR PDKNAEGEQQ KDLSGENSDV RKEHDEKKPK MEETTSGNMR  240
SKQTGKQAKE NSNSGDTAKE NYIHVRARRG QATNSHSLAE RVRREKISER MRLLQELVPG  300
CNKITGKAVM LDEIINYVQS LQQQVEFLSM KLASVNPELN IDIERILSKD ASQILNSRGG  360
NGAIFGLGPG IGSSQHYPPG IFQGTMPSLP STAPQFASLP QTVLENELQG LFHMGFDSTT  420
AIDNIGPNGH LKSEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10120.1	1e-84	bHLH family protein