PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON65580.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 386aa MW: 42517.3 Da PI: 7.4351

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON65580.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.9	4.2e-17	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+ +++q+G+g +W + ++++g++R++k+c++rw++yl PON65580.1 14 KGPWSPEEDTKLKSYIEQHGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	37.3	6.2e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ + G++ W+ Ia+ ++ gRt++++k++w++ PON65580.1 69 GGFSEEEDNIICSLYISIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDTKLKSYIE QHGTGGNWIA LPQKIGLKRC GKSCRLRWLN 60 YLRPNIKHGG FSEEEDNIIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGN 120 KQRKDRQARR GTSITTSSSS SSTGLLIKQE ITKRGTITNT NSNTNTNTSG ILLNSNISMV 180 PGANYNIISI DNQNPYWPEL PVLTASPYSK DGQPCYNDHS SIRRLLIKLG GRFSDDHDDY 240 DVVGSTTGPH IPPSPALPAP ALCNSPALFA QQAQYNTDNY GFIRQILEQG QSSSSTSQLA 300 ELDHQESCIY NSVPDAQVLD GLEFFYGEDS TGNIGKIDGI VNNSTTTTTH GTAEMGWGGE 360 MSSMVYSTTA PNFVFDYQSA QESYMS

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

MGRAPCCDKA NVKKGPWSPE EDTKLKSYIE QHGTGGNWIA LPQKIGLKRC GKSCRLRWLN  60
YLRPNIKHGG FSEEEDNIIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGN  120
KQRKDRQARR GTSITTSSSS SSTGLLIKQE ITKRGTITNT NSNTNTNTSG ILLNSNISMV  180
PGANYNIISI DNQNPYWPEL PVLTASPYSK DGQPCYNDHS SIRRLLIKLG GRFSDDHDDY  240
DVVGSTTGPH IPPSPALPAP ALCNSPALFA QQAQYNTDNY GFIRQILEQG QSSSSTSQLA  300
ELDHQESCIY NSVPDAQVLD GLEFFYGEDS TGNIGKIDGI VNNSTTTTTH GTAEMGWGGE  360
MSSMVYSTTA PNFVFDYQSA QESYMS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49690.1	2e-83	MYB family protein