PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON65787.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family bHLH
Protein Properties Length: 326aa    MW: 36503.6 Da    PI: 4.8024
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON65787.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.20.000712102501055
                 HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 ++RR r  ++ +  +ellP++     +    +++L  ++++Ik+Lq
  PON65787.1 210 QQRRMRFAERVNAFQELLPHS-----TEGCQVSVLDDVIDHIKHLQ 250
                 799*****************8.....5667889************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MEGESSQNNI DFVGNTGNDV GLGPEDDLTG HVLMGSGTGT SWNQSDAVRL PWWVQVQVQP  60
QETSHSYVHF LAESSSGTPS EDMLHLESLP SPKNGTTYGV SGVSDFQEDM PYNHHMGLAW  120
GYKPTEMDAW KLGALMAHNE DMDNESTSTQ HQIHAQNLSS WSQNSDGESY SSRVDISPSA  180
RVASPGSLSK FQSSASKQRN YRNDRAFSKQ QRRMRFAERV NAFQELLPHS TEGCQVSVLD  240
DVIDHIKHLQ LQIKDLCKRR VEGESPTWPI IFREGYGHYF CDQDMLNEPF EEMVAKLLEL  300
NPLAATKLLE MNGLLLMPIE LTKGLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24260.11e-17bHLH family protein