PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON65789.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family M-type_MADS
Protein Properties Length: 234aa    MW: 26967.6 Da    PI: 6.985
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON65789.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF35.51.3e-118451350
                HHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
      SRF-TF 13 fskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                f +R++++ KKA EL  LC+ ev+++ + ++g++  ++
  PON65789.1  8 FQRRKATLKKKAGELGALCNSEVCIVCYEPNGEMEVWP 45
                889*******************************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MEKSNKIFQR RKATLKKKAG ELGALCNSEV CIVCYEPNGE MEVWPEDPTK AHSIIHKYYS  60
RLESCNNNKK REKLNLSDML EKKMKKLEEQ VGNHHHHHYH LDNISVNTNT SNGVGFPIVL  120
PSLWDEELDN FSNDSLMGLS QCLEAKIQKL DEKIELLKGK QRLVSQTQFL KEEHCDCDLP  180
PSLPQHYVSV IKPQEYAASS SHAYSNMLYG DIAQHQSINN FPVHGLEQYW TKMN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18650.11e-14M-type_MADS family protein