PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON65791.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family M-type_MADS
Protein Properties Length: 224aa    MW: 25429.8 Da    PI: 6.8458
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON65791.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF24.43.8e-0810421244
                HHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTS CS
      SRF-TF 12 tfskRrngilKKAeELSvLCdaevaviifsstg 44
                 f +R++++ KKA EL   C+ ev+++ + ++g
  PON65791.1 10 IFQRRKATLKKKAGELGARCNSEVCLVCYEPNG 42
                5999*************************9886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MVNTEKSSKI FQRRKATLKK KAGELGARCN SEVCLVCYEP NGGEVDVWPE DHAKAQSIIH  60
KYYSRLESSS NNTYKKRKEK LNLSDMLEKK MKKLEEQVGN QYHHHLDNNT SINTIDDVGF  120
PIVLPSLWDE ELDNLSGDSL MGLSQCLEAN IRKLDEKIEL LKQTSTQSRK EEHYSDLPPS  180
VLPHQYVSVI MPQVYASSSS HACSNILHGD IAPLHQLCNI SYTL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18650.14e-14M-type_MADS family protein