PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON65943.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family FAR1
Protein Properties Length: 227aa    MW: 26378.1 Da    PI: 8.122
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON65943.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR184.41.8e-2661149189
        FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                 +fY+eYA+++GF +r+++ ++s+ +++i +r++ C+k+g++ + +++  + r++r+ +r gCka++ vk +k+gkw vt+++++H+H+l
  PON65943.1  61 EFYDEYARRLGFVMRIDQCRRSEVDKRILSRRLSCNKQGFSVKARDEVGHVRKQRSRSREGCKAMVLVKVTKSGKWAVTRFVKDHTHPL 149
                 6**********************************************99**************************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MLYDFNYQFT IHGFQILKVN LEEGAGTTET SGERDSVVHE ERPVLEPYLG MEFDSEEAAK  60
EFYDEYARRL GFVMRIDQCR RSEVDKRILS RRLSCNKQGF SVKARDEVGH VRKQRSRSRE  120
GCKAMVLVKV TKSGKWAVTR FVKDHTHPLI VSDCPSWSSV DTKDRRIAEL KMELDCQDRI  180
CESYRGQLLT FLKNVEEQTE MLSTKIGIVV NNIREVESGI QKFPQKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.14e-63FAR1 family protein