PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON65945.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family FAR1
Protein Properties Length: 251aa    MW: 29332 Da    PI: 6.3199
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON65945.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR180.92.2e-2577167190
        FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                 +fY  Y++++GF+vr++++++s+ n+ ++ ++fvCskeg+re++    +++   + + tr gC a+l+v +++ +kw+vtk+ +eHnH+l+
  PON65945.1  77 EFYIVYGRHTGFTVRIHHNRRSRINNMVIGQDFVCSKEGFREKKYACrKDRVLPPPPITREGCPAMLRVALRDGEKWVVTKFTEEHNHSLM 167
                 6*****************************************998772233334899********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MESASSQSFD SDESEKCLQV ESYDEHVLVD DEITEQVDLC TDGVHRSVEQ SNESLPIGNA  60
VRPYIGMEFK SRDDAREFYI VYGRHTGFTV RIHHNRRSRI NNMVIGQDFV CSKEGFREKK  120
YACRKDRVLP PPPITREGCP AMLRVALRDG EKWVVTKFTE EHNHSLMSPS KVPWRGSGKN  180
MITEDEKDRR IRELTLELSN ERQRCKRRCA AYQEQLRMIL KDIEQHTDQL SKRVQDIVQK  240
IKELENEDSD I
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1202207RQRCKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.13e-37FAR1 family protein