PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON66247.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

C2H2

Protein Properties

Length: 331aa MW: 36217.3 Da PI: 8.1286

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON66247.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.1	0.0012	173	195	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k+F+++ L H +H PON66247.1 173 FECSSCKKVFRSHQALGGHRASH 195 89**************9999888 PP

Sequence ? help Back to Top
Protein Sequence Length: 331 aa Download sequence
MNNNTAFDFD LRFEVLPPDF SANRHQNPRK KRSKQTRPEQ SALGGVAPRA KYDKRPDPGA 60 PKITRPCTEC GKKFWSWKAL FGHMRCHPER QWRGINPPPN TRPVSPPLMN SETAQMMAGN 120 YESDREIATC LLLLANGIPS GTATGTADHS TSTSYDVVVE NSGGGGGGDG CVFECSSCKK 180 VFRSHQALGG HRASHKNVKG CFAITKSSTT TTTTTTTTTT ESTEAEEDQT TALREKRQQG 240 QGQGHNQHYY YCKCGICFKG FTSGQALGGH MRCHWYRDDD QAGLKEQGFI TSNGLDLNLP 300 APAMELDDDY SSSNSFTSCS GLSNLDLRLG L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35280.1	2e-69	C2H2 family protein