PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON66467.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family bHLH
Protein Properties Length: 324aa    MW: 36079.5 Da    PI: 4.4778
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON66467.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.86.1e-11138181755
                 HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 + ErrRR r+++++  Lr+l+P+      +K++Ka+i+  Av Y+++Lq
  PON66467.1 138 ISERRRRGRMKEKLYALRSLVPNI-----TKMDKASIVGDAVLYVQDLQ 181
                 67*********************7.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MENINEFHLH DFIADSNFDQ FIDLIRGENE DQVTNFACGD LIINGSNLIA TNNDRSMDPI  60
IAETENPVFG FDAAMSTIVP SDPNSLSFIG TLPEYFDGEI MMVGEDDDEN DGEDSSGTTT  120
NTTTTKKRPK LDRSRTLISE RRRRGRMKEK LYALRSLVPN ITKMDKASIV GDAVLYVQDL  180
QTQAKKIRAE IASLEASLEE AEKDQGSTEN SKKIKVVKAN DDSVAKAKTI TQIEMFQVEE  240
RGFYVKVVSN KGEKSAISLY KALESLTNFN VQSSNLATVS DTYVLTFTLN VKCDQQEPIN  300
LPNLKLWVTG AFLNQGFELK TASL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1126144KKRPKLDRSRTLISERRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.11e-65bHLH family protein