PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON66470.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

bHLH

Protein Properties

Length: 364aa MW: 40720.5 Da PI: 5.1683

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON66470.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30.7	5.8e-10	173	215	7	54
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + Er+RR r+++++ Lr+l+P+ +K++Ka+i+ Av Y+++L PON66470.1 173 ISERKRRGRMKEKLYALRSLVPNI-----TKMDKASIVGDAVIYVQEL 215 78*******************7.....7**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MYKMDEAIIP NSSAPNPIIH NFNGLELHYF FDGTNNIIHD DRSVNLIRGA ETENPFVNFD 60 HCDLINGTNY FVDDHDHNQF GPLTPGDHVF GFSGVSTGST DDYNPNISLF LNNLASPSFD 120 GRPRSGDHDL EEEEVKEEEE NDREVSSETN TGTSASSAKK SKAKGGDRSK TLISERKRRG 180 RMKEKLYALR SLVPNITKMD KASIVGDAVI YVQELKMQAK KLKDEIRGLE TSLLGSQRYQ 240 GSSININNNP SQVHDGNANN ITNQLIIKNI VQMDMFQVEE RGFYMRLVCN KGEGVVASLY 300 KVLESFTSFD VQTSNLASTV DGFELKVTLR VKDTVREMSL PDLKLWVIGA LLNQGFEFKS 360 AFST

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MYKMDEAIIP NSSAPNPIIH NFNGLELHYF FDGTNNIIHD DRSVNLIRGA ETENPFVNFD  60
HCDLINGTNY FVDDHDHNQF GPLTPGDHVF GFSGVSTGST DDYNPNISLF LNNLASPSFD  120
GRPRSGDHDL EEEEVKEEEE NDREVSSETN TGTSASSAKK SKAKGGDRSK TLISERKRRG  180
RMKEKLYALR SLVPNITKMD KASIVGDAVI YVQELKMQAK KLKDEIRGLE TSLLGSQRYQ  240
GSSININNNP SQVHDGNANN ITNQLIIKNI VQMDMFQVEE RGFYMRLVCN KGEGVVASLY  300
KVLESFTSFD VQTSNLASTV DGFELKVTLR VKDTVREMSL PDLKLWVIGA LLNQGFEFKS  360
AFST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28160.1	4e-77	bHLH family protein