PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON66641.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GeBP
Protein Properties Length: 239aa    MW: 27970.6 Da    PI: 7.8215
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON66641.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57373.44.3e-2351140697
      DUF573   6 lwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
                 l+s++D+i+lLqGli f +k+gk+   +  ++y+ +kks+  ++s +ql   + r+ +Kf +++ k+ +g +p+f+++hdqk++elsk+iWg
  PON66641.1  51 LFSQDDQILLLQGLIAFSEKHGKN--RNFAEIYDVIKKSLPPNMSMKQLRRQVSRMERKFVDHELKKCDGGSPTFANPHDQKVYELSKIIWG 140
                 6*********************76..89*************************************99************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MDDTDHYNSI VPDSADDYER PSEKKAKLTA EEKMKQVDDA HQLKQASQII LFSQDDQILL  60
LQGLIAFSEK HGKNRNFAEI YDVIKKSLPP NMSMKQLRRQ VSRMERKFVD HELKKCDGGS  120
PTFANPHDQK VYELSKIIWG NSTTTSTTTT TTNTTVVHED HRLQDSDDID TPLSFVLKDF  180
VTHNGLDLNW VEESKRKHLA RMWKKYKIAE CNYFHVRAKF QDMMHHVKMQ VYNRELARQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G11510.11e-11GeBP family protein