PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON66777.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family MYB_related
Protein Properties Length: 295aa    MW: 32390.2 Da    PI: 10.1523
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON66777.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding35.13.2e-11555146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                     +++WT+eE+  l+ +v ++G g W+tI            R+  ++k++w++
       PON66777.1  5 KQKWTAEEEAALKAGVIKHGAGKWRTILTDPEfssilHLRSNVDLKDKWRN 55
                     79***********************************88***********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MGAPKQKWTA EEEAALKAGV IKHGAGKWRT ILTDPEFSSI LHLRSNVDLK DKWRNINVTA  60
IWGSRQKAKL ALKRNLQTPK HDNNPLPVST VPQNDEEIVD AKPLAVSGET QRNTNSKEPN  120
ARLDKLILDA ITNLKEPRGS DRAAIAIYIE EQYWAPPNLK KLLSTKLKHM TANGKLIKVK  180
HRYRIAPSLT SAEKRRASPM LLLEGRSKDY SIAEKTEVNV LTKSQVDADL TKMRSMTAQE  240
AAAAAAQAVA EAEAAIAAAE EAAREAEAAE AEAEAAQVFA KAAMKALKSK KLCCW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.12e-82MYB_related family protein