PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON66819.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

G2-like

Protein Properties

Length: 490aa MW: 53508 Da PI: 4.6617

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON66819.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	109.5	1.7e-34	264	318	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+rWtpeLHe+Fveav+qLGGse+AtPk +l+lmkv+gLt++hvkSHLQkYR+ PON66819.1 264 KPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRT 318 79****************************************************8 PP
2	Myb_DNA-binding	56.9	4.6e-18	266	317	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av+qlGg t+k + + m +g+t +++ks++qky+ PON66819.1 266 RMRWTPELHEAFVEAVNQLGGSeraTPKGVLKLMKvEGLTIYHVKSHLQKYR 317 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 490 aa Download sequence
MEARPALSIS RSGAKQLTNM GLSGALSSPL PVLPAHFEEA YPKLPDSQQV SMERELMTSP 60 VTHASRLPSN SGVMGHIFSS SSGYSSDLHY SSVSPHKNQS RNAPFISQSS TNGVSFPVPQ 120 SSNSTLLPST TSGHYAKENS ASWCTDSVSD FLDFPVNTSV ENSQVEGSSC SGIMAPEEFG 180 KRNDWQEWAD QLITDDDALN SNWDELLADT NVTDIEPKMA YQVSKSSSSI QAQQSQVHQQ 240 LSAPSGEIQT IATPSSSTNN AAAKPRMRWT PELHEAFVEA VNQLGGSERA TPKGVLKLMK 300 VEGLTIYHVK SHLQKYRTAR YRPESSEGSS DKKLTSIDEI SSLDLKTGIE ITEALRLQME 360 VQKRLHEQLE IQRNLQLRIE EQGRCLQMMF EKQCKSNMDK LKASSSTLEN PSVVSSDAVQ 420 DSPIKGELEA SESDHGKTGT DQGDAKTTME EGSDELCEQQ EAPQEEAPDD LEPDACGASS 480 QSSKRPRTSE

Sequence ? help Back to Top

Protein Sequence Length: 490 aa Download sequence

MEARPALSIS RSGAKQLTNM GLSGALSSPL PVLPAHFEEA YPKLPDSQQV SMERELMTSP  60
VTHASRLPSN SGVMGHIFSS SSGYSSDLHY SSVSPHKNQS RNAPFISQSS TNGVSFPVPQ  120
SSNSTLLPST TSGHYAKENS ASWCTDSVSD FLDFPVNTSV ENSQVEGSSC SGIMAPEEFG  180
KRNDWQEWAD QLITDDDALN SNWDELLADT NVTDIEPKMA YQVSKSSSSI QAQQSQVHQQ  240
LSAPSGEIQT IATPSSSTNN AAAKPRMRWT PELHEAFVEA VNQLGGSERA TPKGVLKLMK  300
VEGLTIYHVK SHLQKYRTAR YRPESSEGSS DKKLTSIDEI SSLDLKTGIE ITEALRLQME  360
VQKRLHEQLE IQRNLQLRIE EQGRCLQMMF EKQCKSNMDK LKASSSTLEN PSVVSSDAVQ  420
DSPIKGELEA SESDHGKTGT DQGDAKTTME EGSDELCEQQ EAPQEEAPDD LEPDACGASS  480
QSSKRPRTSE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	9e-96	G2-like family protein