PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON66957.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

MYB

Protein Properties

Length: 294aa MW: 33628 Da PI: 4.9444

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON66957.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.5	1.1e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd +lv +v+++G +W+ +r g++R++k+c++rw +yl PON66957.1 14 KGTWTPEEDRKLVAYVTRYGCWNWRQLPRFAGLKRCGKSCRLRWMNYL 61 799***************99**********************97 PP
2	Myb_DNA-binding	55.9	1e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ ++eE+e ++++++ lG++ W++Ia++++ gRt++++k++w+++l PON66957.1 67 RGNYSQEEEETIIKLHESLGNR-WSAIAAKLP-GRTDNEVKNYWHTHL 112 899*****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 294 aa Download sequence
MVRTPCCDQN GMKKGTWTPE EDRKLVAYVT RYGCWNWRQL PRFAGLKRCG KSCRLRWMNY 60 LRPNVKRGNY SQEEEETIIK LHESLGNRWS AIAAKLPGRT DNEVKNYWHT HLKKRVQQNS 120 ANRKEESADD DSNSNIYNFS PIIEDFHNQE LLMESIHDNV PRESNILALT NINHPQVLDH 180 HFPMSPQPSS STTSEVSTST TSANAAETTS TNDNNLVADY DNNVGNDDAF EAFSGFSDNF 240 WTEPFLADHS SYIPSDFITS FMDTEFFSPV FDANLFFTGS TTTGNFYEEN LVGI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31180.1	8e-63	MYB family protein