PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON66958.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

MYB

Protein Properties

Length: 292aa MW: 32895.8 Da PI: 5.3719

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON66958.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.8	8e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W+ eEd++l+ +v+++G +W+ ++ g+ R++k+c++rw +yl PON66958.1 14 RGAWSSEEDDKLKAYVERYGHWNWRELPKFAGLSRCGKSCRLRWMNYL 61 89****************99**********************97 PP
2	Myb_DNA-binding	58	2.2e-18	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T+eE+ l++++++++G++ W+ Ia++++ gRt++++k++w+++l PON66958.1 67 RGSYTAEEESLIIKLHEEHGNK-WSMIAAKLP-GRTDNEIKNHWHTHL 112 8999****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 292 aa Download sequence
MVRAPFYDKY GVKRGAWSSE EDDKLKAYVE RYGHWNWREL PKFAGLSRCG KSCRLRWMNY 60 LRPDVKRGSY TAEEESLIIK LHEEHGNKWS MIAAKLPGRT DNEIKNHWHT HLKKRSKLTH 120 HDHDHDQKPT KFQTKDLYSS EYSSGGDRNS HGESEAQSSS STTAPPDIAG LSPQILESSQ 180 YSPTETTSST STGSSSSTSS SSTSGAPEEL VSTTNSTDDV AEDSTTHHDP SKLEALSIQE 240 QYCGGDFWTE PFLEDNNVMS IQNEYYPACF AEEGILSSYN LSFYDGGMDY LL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31180.1	2e-56	MYB family protein