PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON67314.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ZF-HD
Protein Properties Length: 339aa    MW: 36520.1 Da    PI: 7.8218
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON67314.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer109.81.4e-3467124359
  ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrevee 59 
                   v+YkeClkNhAa+lGgha+DGCgEfmps++++ +++++lkCaACgCHRnFHRre++e
   PON67314.1  67 VVTYKECLKNHAATLGGHALDGCGEFMPSPNATaSDPTSLKCAACGCHRNFHRREPDE 124
                  589***************************99999*******************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MEITPTITTT TATNTASTKS PEADSETPTR IQSAKPLSFS NGVLKRHNPH HHHHHQHHHH  60
LAAAPVVVTY KECLKNHAAT LGGHALDGCG EFMPSPNATA SDPTSLKCAA CGCHRNFHRR  120
EPDEPTPTAA ANTTHVIEYQ PHHRHHPPPP PPVHHPGNRS PNSASPPPIS SSYYPSAPHM  180
LLALSTGIAG PGAQENAPGV GMAGTGTGMV TPSPNARKRF RTKFSQDQKE KMYQFAERVG  240
WKMQKRDEEL VMEFCNEVGV DKGVLKVWMH NNKNTLGKKD VNGGSGGRSS LLEQAHNNGG  300
SNNNNDNNNS ENDNVQNPNH YQDDDGGAHV ATNGSSSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28920.17e-71ZF-HD family protein