PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON67333.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 92aa    MW: 10293.6 Da    PI: 9.3634
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON67333.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.11.5e-0821581854
                HHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH 18 safeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                +  ++Lr+l+P+ + + ps+K+s + +L+++++YI++L
  PON67333.1 21 ELVSKLRQLVPEiNRNRPSGKVSASKVLQETCNYIRNL 58
                56689*******999*********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 92 aa     Download sequence    
MSSRRSRQSG SSRISDDQIL ELVSKLRQLV PEINRNRPSG KVSASKVLQE TCNYIRNLHR  60
EVDDLSDRLS QLLASIDADS AEAAIIRSLV TQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28857.13e-25bHLH family protein