PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON67354.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family C2H2
Protein Properties Length: 248aa    MW: 27086.1 Da    PI: 7.1134
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON67354.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.20.0002796118123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++C++C + F ++  L  H++ H
  PON67354.1  96 FSCNYCRRKFYSSQALGGHQNAH 118
                 89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MITPDINLEC ENDSEVSSQV ASNAALQDSS PNPSKDSTTS SSCLTNVIKL QEDSRPVSLD  60
LTLQFSSSTN VELKGRGESS SDVATHTSVT TIPRVFSCNY CRRKFYSSQA LGGHQNAHKR  120
ERTMAKRAMR MGIFSGRYTS LASLPLHGSA FRSLGVEAHA AVHQRAIPSK RPPDTRGGAR  180
FEQGYYGLPV FVDDDDVDLF WPGSFRQVDE GFGGGMDVQF TQSSDRNVVT KLPSPRTESS  240
TPDLTLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66140.19e-44C2H2 family protein