PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON67426.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family FAR1
Protein Properties Length: 124aa    MW: 14423.7 Da    PI: 9.968
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON67426.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR187.71.7e-271199189
        FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89
                +fY+eYA+++GF +r+++ ++s+ +++i +r++ C+k+g++ + +++  + r++r+ +r gCka++ vk +k++kw vt+++++H+H+l
  PON67426.1 11 EFYDEYARRLGFVMRIDQCRRSEVDKRILSRRLSCNKQGFSVKARDEVGHVRKQRSRSREGCKAMMLVKVTKSAKWAVTRFVKDHTHPL 99
                6**********************************************99**************************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 124 aa     Download sequence    
MEFDSEEAAK EFYDEYARRL GFVMRIDQCR RSEVDKRILS RRLSCNKQGF SVKARDEVGH  60
VRKQRSRSRE GCKAMMLVKV TKSAKWAVTR FVKDHTHPLI VSDCPSWSSV GLLLLSELMM  120
EQPP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.12e-42FAR1 family protein