PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON67508.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family Whirly
Protein Properties Length: 199aa    MW: 22244.2 Da    PI: 10.5776
Description Whirly family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON67508.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Whirly71.61.3e-22108161154
      Whirly   1 svyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqs 54 
                 s+yk+kaal+v++++p+f+aldsg++k++++G++ll++a+a+++r ydW++kq 
  PON67508.1 108 SIYKGKAALTVEPRAPEFTALDSGAFKVSKEGFVLLQFAPAAGVRVYDWSRKQF 161
                 7***************************************************84 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MMMVMRPYSL SSSSSPFLVT TQNPNLCLSH SFYSSPFPLT SGFNFDISRF SANPKSVRKR  60
LFLKCRQSDN FEQQKFNTTT APNNDSSFAS QTSPRGGQLP ARFFVGHSIY KGKAALTVEP  120
RAPEFTALDS GAFKVSKEGF VLLQFAPAAG VRVYDWSRKQ FILPHLIGWS AFANSIKPED  180
TSRGNNASPR FGGDYEWKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14410.12e-41Whirly family protein