PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON67719.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GRAS
Protein Properties Length: 594aa    MW: 65778.8 Da    PI: 6.1228
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON67719.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS278.61.9e-852275932374
        GRAS   2 velLlecAeavssgdlelaqalLarlsel..aspdgd....pmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                 +e L+++A++++s+dl+ aq +L rl+++  ++p+g+     +qR+a yf+eAL++ l++      +  +++ +s+ + ++++  +k+fs +sPi+ fs
  PON67719.1 227 IEDLIRVADCFDSDDLQFAQVILDRLNNRlrSTPSGKpvgkQLQRAAIYFMEALQSLLSG------SNRTARLSSWAEIVQTIRGYKAFSGISPIPMFS 319
                 678************************9988777776444478*****************......5666777777789******************** PP

        GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp....egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledl 189
                 h+t Nqa+lea+ g+  +H+iDfdi+ G+Q+++L+++La++      ++p lR+T+v+++e   + e + ++e+L++fA+el++ f+ +++++++++++
  PON67719.1 320 HFTSNQALLEALGGSAFIHVIDFDIGLGGQYASLMRELAEKWdslrVNQPILRVTAVVAEE--YAVESRLIRENLTQFAQELNIWFQVEFIIVRTFKAM 416
                 ***************************************998666677***********66..99999******************************* PP

        GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe...adhnsesFlerflealeyysalfdsleaklpreseerikv 285
                 ++++ +++ gE++aV ++ ++ r l            +L  v++lsP v v+v+ +    ++++ sF ++f+  le+ys++++sl+a +    e+ +k+
  PON67719.1 417 SFKAVNFRDGEKTAVLFSSAVLRRL---------GGGFLGDVRRLSPAVAVFVDGDgfwGETGARSFRRGFVCGLEFYSMVMESLDAAM-VGPEWIRKI 505
                 ******************9999998.........358*******************877788999********************8885.5679999** PP

        GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 E+ +l+++i  +v ++ ae +    + ++ re+++ aG++pv+ls++a  qa++ll kv+++g++v +++++lvl+W++r+Lv++S+Wr
  PON67719.1 506 EAYVLKPRIAAAVEAAAAE-VGGGIRTASFREMFHGAGLRPVQLSQFADFQAECLLGKVQVRGFHVAKRQAELVLCWHERALVATSVWR 593
                 ******************9.88888899************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 594 aa     Download sequence    
MIVPVTTPQN NLIQSPNPKS DNNNNNSNNS NNSNNNNSSN IGFHSPARIP NLCNEPTSVL  60
DLRRSSSPVA EKPAKDSAVS DVVLAQTTND RLEWDDQVLH NLDNWDTIMR DLGLHDDSAP  120
SFTTTSTTTT TTGHFVPQLS TCDPQIPHFP EFTHPQPFDP TRLVHSADFS LSEWCSNHSN  180
STSSFGSQNL NVFEVSTDFH LGGNNHNNNN NTTTANNNTC NIGFDFIEDL IRVADCFDSD  240
DLQFAQVILD RLNNRLRSTP SGKPVGKQLQ RAAIYFMEAL QSLLSGSNRT ARLSSWAEIV  300
QTIRGYKAFS GISPIPMFSH FTSNQALLEA LGGSAFIHVI DFDIGLGGQY ASLMRELAEK  360
WDSLRVNQPI LRVTAVVAEE YAVESRLIRE NLTQFAQELN IWFQVEFIIV RTFKAMSFKA  420
VNFRDGEKTA VLFSSAVLRR LGGGFLGDVR RLSPAVAVFV DGDGFWGETG ARSFRRGFVC  480
GLEFYSMVME SLDAAMVGPE WIRKIEAYVL KPRIAAAVEA AAAEVGGGIR TASFREMFHG  540
AGLRPVQLSQ FADFQAECLL GKVQVRGFHV AKRQAELVLC WHERALVATS VWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36710.11e-147GRAS family protein