PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON68042.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family MYB_related
Protein Properties Length: 321aa    MW: 35746.6 Da    PI: 9.5333
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON68042.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.33.5e-135195147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     r +WT +E++++++a +++  + Wk+I + +g  +t  q++s+ qky
       PON68042.1 51 RESWTDQEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 95
                     789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MVSVNRNPAP AFYFFDPMNM GLPPAAAANT TSFGDDPNKK IRKPYTITKS RESWTDQEHD  60
KFLEALQLFD RDWKKIEAFV GSKTVIQIRS HAQKYFLKVQ KSGTTEHVPP PRPKRKAAHP  120
YPQKAPKNAP NVTHVTGPFQ SSAASLEPGY IYRPDSSSML GNPVTGAALP SWSYSSVPPV  180
NVTQVHKDDG RLFVPTVANN SCYSSSTEST PRTKPASEII DPRVPSKAMR VMPDFAQVYS  240
FIGSVFDANS TGHLQRLKQM DPINLETALL LMRNLSVNLM SPEFEDLRKL LSSYDVDEDM  300
VDKSIGTCNF RFKSENAILS A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01280.21e-100MYB_related family protein