PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON68120.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

HSF

Protein Properties

Length: 405aa MW: 46318.6 Da PI: 4.4273

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON68120.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	110.2	1.5e-34	21	112	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k ye+++de+++++isw+++++sfv++d+++f+ +LpkyFkhsnf+SF+RQLn+YgF+kv++++ w F+++ F +g+k+ll++i PON68120.1 21 FLRKCYEMVDDETTDSIISWNDTNDSFVIWDMTQFSAGLLPKYFKHSNFSSFMRQLNIYGFRKVDTDR---------WIFANDGFIRGQKHLLKNIC 108 9***************************************************************99.........****************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+k PON68120.1 109 RRKY 112 *985 PP

Sequence ? help Back to Top
Protein Sequence Length: 405 aa Download sequence
MVKPSETGDG GSASLAAIAP FLRKCYEMVD DETTDSIISW NDTNDSFVIW DMTQFSAGLL 60 PKYFKHSNFS SFMRQLNIYG FRKVDTDRWI FANDGFIRGQ KHLLKNICRR KYAQGPDQRK 120 TTKQQEHHPE ESFENVENGL WKEVENLKID KNALTQELVK LRQHQETAEN KLLVLRERLQ 180 GMEKNQQQML SFLVMAVQSP GIFVQFLQPK ENNWRMSEAG NMLQEVLEDD KPVASDGTMV 240 RYLPPTDETS HPMFTSTSAA AEKPPESGSY PDGMQDFFLN SDFMKVLMDE KLSPLETHAP 300 FILPELSDDD GSWEQLLLAS PFRENAQDTK DDEDTPDTGM EDSTLSRIPL EQSQNFDSFE 360 QMENSQNFGI DSTVFEAQSA KSHNTETLTK QMGILSSELE NKRET

Sequence ? help Back to Top

Protein Sequence Length: 405 aa Download sequence

MVKPSETGDG GSASLAAIAP FLRKCYEMVD DETTDSIISW NDTNDSFVIW DMTQFSAGLL  60
PKYFKHSNFS SFMRQLNIYG FRKVDTDRWI FANDGFIRGQ KHLLKNICRR KYAQGPDQRK  120
TTKQQEHHPE ESFENVENGL WKEVENLKID KNALTQELVK LRQHQETAEN KLLVLRERLQ  180
GMEKNQQQML SFLVMAVQSP GIFVQFLQPK ENNWRMSEAG NMLQEVLEDD KPVASDGTMV  240
RYLPPTDETS HPMFTSTSAA AEKPPESGSY PDGMQDFFLN SDFMKVLMDE KLSPLETHAP  300
FILPELSDDD GSWEQLLLAS PFRENAQDTK DDEDTPDTGM EDSTLSRIPL EQSQNFDSFE  360
QMENSQNFGI DSTVFEAQSA KSHNTETLTK QMGILSSELE NKRET

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67970.1	1e-106	HSF family protein