PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON68652.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 217aa    MW: 23773.4 Da    PI: 5.882
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON68652.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.83.1e-191765355
         AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                y+GVr +k +g+Wv+eIr+p   gk++r++lg++ t+e+Aa+a++ a++ l+g
  PON68652.1 17 YRGVRKRK-WGKWVSEIREP---GKKTRIWLGSYETPEMAAAAYDVAALHLRG 65
                9****999.**********8...557*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MEQVIESAFS HVASPAYRGV RKRKWGKWVS EIREPGKKTR IWLGSYETPE MAAAAYDVAA  60
LHLRGRGARL NFPELAEGLP RPATSRAEDV QVAAQQAAMR FRRAPIRVSS EDAQNDMSFG  120
GSSGSSSDSS GGAKSHEGHY SVPVTVGLSP SQIQAINDSP LDSPKMTWMQ MAAAGAGAVF  180
FGDQYCYYSS TSHHVLLNDD VEFCDFEEIQ HDSIWDI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33760.17e-42ERF family protein