PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON68706.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 518aa MW: 57162.8 Da PI: 6.5098

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON68706.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.9	4.9e-18	39	86	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WTt Ed +lv++v+++G g+W+++ + +g+ R++k+c++rw ++l PON68706.1 39 KGPWTTSEDAILVEYVRKHGEGNWNAVQKNLGLARCGKSCRLRWANHL 86 79******************************************9986 PP
2	Myb_DNA-binding	51	3.4e-16	92	135	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++T+eE+ ++++++ +lG++ W++ a+ ++ gRt++++k++w++ PON68706.1 92 KGSFTPEEERIIIELHSKLGNK-WARMASQLP-GRTDNEIKNYWNT 135 799*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 518 aa Download sequence
MSNHMMINNE GADERAAAVA GTKTAEEEGG FRDGGSLKKG PWTTSEDAIL VEYVRKHGEG 60 NWNAVQKNLG LARCGKSCRL RWANHLRPNL KKGSFTPEEE RIIIELHSKL GNKWARMASQ 120 LPGRTDNEIK NYWNTRMKRR QRAGLPLYPH DIPVQYQNDN NQRHSSSSSS SFSSQLLSPS 180 HHHHHHSPKL PNNNYNFHHH HSVFHSRPSD NSAQLFTANN SGFALPICSS GFPFGSSPSS 240 SSALFNQRTH IPIPQTTLPN PSFRYNVPAG FIGSFGTLSS MVTGSAPYDP SAVEFHQVPS 300 SVSVNMVSEL PSTQTMPLQS TTPASSYISG GEGGEEFEFQ ESRGNNSGLL DALLFESQAL 360 SRNEKAKRKC SPVPAPPEKG KRFFPENHSA EEEEEEEEEE HTIGSESVLK NSGYENYGRT 420 ENFSTSCQSS IGIEQSEEPL DDDLMSLLNN FPTSMSVPDW YGGSGGNSKR ENLGVTSGYA 480 RRVEDVVAQD SSLVPPTTTG KHERSLDSCY WNNMPGIC

Sequence ? help Back to Top

Protein Sequence Length: 518 aa Download sequence

MSNHMMINNE GADERAAAVA GTKTAEEEGG FRDGGSLKKG PWTTSEDAIL VEYVRKHGEG  60
NWNAVQKNLG LARCGKSCRL RWANHLRPNL KKGSFTPEEE RIIIELHSKL GNKWARMASQ  120
LPGRTDNEIK NYWNTRMKRR QRAGLPLYPH DIPVQYQNDN NQRHSSSSSS SFSSQLLSPS  180
HHHHHHSPKL PNNNYNFHHH HSVFHSRPSD NSAQLFTANN SGFALPICSS GFPFGSSPSS  240
SSALFNQRTH IPIPQTTLPN PSFRYNVPAG FIGSFGTLSS MVTGSAPYDP SAVEFHQVPS  300
SVSVNMVSEL PSTQTMPLQS TTPASSYISG GEGGEEFEFQ ESRGNNSGLL DALLFESQAL  360
SRNEKAKRKC SPVPAPPEKG KRFFPENHSA EEEEEEEEEE HTIGSESVLK NSGYENYGRT  420
ENFSTSCQSS IGIEQSEEPL DDDLMSLLNN FPTSMSVPDW YGGSGGNSKR ENLGVTSGYA  480
RRVEDVVAQD SSLVPPTTTG KHERSLDSCY WNNMPGIC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32460.1	3e-75	MYB family protein