PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON68708.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family MYB_related
Protein Properties Length: 241aa    MW: 27944.2 Da    PI: 6.8017
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON68708.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.62.8e-08158196544
                      -HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding   5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 
                      T++++ ++v ++ ++G++ W++Ia+ +++g t  ++k++w
       PON68708.1 158 TQQDEAKIVILHLEHGND-WSRIANQLPEGITSLDVKNYW 196
                      8999**************.********************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MMNLQGGASE EEGGHNDGQR KRLLWTEEED RNLTRSCNKY PKFVDSQEEE KTRIDRPLHP  60
YRGNNWPRDH QQQNYGIDKF GPSSSQTTVP SPSFQKNIPG RTRMRAKEEE KTLEDYVLKQ  120
GEGNWDEVQT KTGLDMDPNA CKITWEKIMK SRQPALLTQQ DEAKIVILHL EHGNDWSRIA  180
NQLPEGITSL DVKNYWDSRK KAHEIAGLPL YSDQERQQYL ANIINRKDSL LTNKLLQLGL  240
N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G32460.16e-20MYB family protein