PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON68796.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family GRAS
Protein Properties Length: 642aa    MW: 73532 Da    PI: 8.6215
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON68796.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS378.67.6e-1162716403374
        GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101
                 +lL++cA+av+s d+++a++l+++++++++p+gd +qRla+yf++AL+arla++ + ly+ l +se s   +++ l  ++++  +sP+l++s+  aN++
  PON68796.1 271 TLLTQCAQAVASYDQRNATQLIKQIRQHSTPHGDGTQRLAHYFANALEARLAGTRTALYSPLVSSEMS---VVDILRGHQVYITASPFLRMSYCFANRM 366
                 69*********************************************************999999998...**************************** PP

        GRAS 102 IleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198
                 I + +++++++HiiDf+i++G+QWp L+q L+ +p+gpp+lRiTg++  ++g   ++++eet++rLak++++++vp ef++ +++++e++++e+L++++
  PON68796.1 367 IRDLAQNAKTIHIIDFGIQYGFQWPGLIQHLSRKPGGPPKLRITGLEFLQPGfrPSHRVEETKRRLAKYCQRFNVPSEFKM-ITQKWETIRYEDLNINR 464
                 *************************************************99999***************************.799************** PP

        GRAS 199 gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnv 297
                 +E+++Vn+ ++l++++de+v ++++rd+vLkl+++++P++++++  +  +n++ F++rf eal +ysalfd++++++p e++ r + E+++ gr+i+nv
  PON68796.1 465 DEVVVVNCFYRLKHIPDETVVMNNPRDTVLKLIRRINPELFIHAVTNGTYNAPFFVTRFREALFHYSALFDMFDNTVPCEEQYRLVFEKAIYGRDIENV 563
                 *************************************************************************************************** PP

        GRAS 298 vacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 +aceg er+er e++++W+ r ++aGFk++pl++k+ + +k  +r  + + + ve + ++l++gWk+r+L+++S+W+
  PON68796.1 564 IACEGLERVERPESYKQWQVRNTRAGFKQAPLDQKTFEAVKNKVRSSYHKDFVVERHGEWLLQGWKGRRLLAISCWK 640
                 ************************************************888*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 642 aa     Download sequence    
MDTLLAGFAV RMSSFRFNHS SVSFHSNQNF VREPVNHDGN LEPQTNLHHA SYDSSQSSSP  60
SSGVDSPGYS DSFNATLKFI SEMLMEEEDL ERKALILQDP LALQAAEKSF YDVLGQNYPP  120
CSDIGEFEPK SSCVKASFDT RLVQGSNFGG VRSVAQFRGR TGESSSFFQK GKAQLIDLDR  180
VGFSLPTGHR GKKNHQREYG DGDQEEVRSN KQSAVYGDDC EPTEMLDKVL LYHGDNEQES  240
LQAEKLRLKQ GKGSGRSKRQ DNKTEMVDLW TLLTQCAQAV ASYDQRNATQ LIKQIRQHST  300
PHGDGTQRLA HYFANALEAR LAGTRTALYS PLVSSEMSVV DILRGHQVYI TASPFLRMSY  360
CFANRMIRDL AQNAKTIHII DFGIQYGFQW PGLIQHLSRK PGGPPKLRIT GLEFLQPGFR  420
PSHRVEETKR RLAKYCQRFN VPSEFKMITQ KWETIRYEDL NINRDEVVVV NCFYRLKHIP  480
DETVVMNNPR DTVLKLIRRI NPELFIHAVT NGTYNAPFFV TRFREALFHY SALFDMFDNT  540
VPCEEQYRLV FEKAIYGRDI ENVIACEGLE RVERPESYKQ WQVRNTRAGF KQAPLDQKTF  600
EAVKNKVRSS YHKDFVVERH GEWLLQGWKG RRLLAISCWK PA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59450.11e-176GRAS family protein