PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON68901.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

bHLH

Protein Properties

Length: 435aa MW: 47514.3 Da PI: 8.471

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON68901.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	50.4	4.1e-16	241	286	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn+ ErrRRdriN+++ L++l+P+a K +Ka++L +++eY+k+Lq PON68901.1 241 HNQSERRRRDRINQKMKALQKLVPNA-----SKTDKASMLDEVIEYLKQLQ 286 9**********************9.....7****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 435 aa Download sequence
MSHCVVPSWN LRHQRQEQVE GEEGNRSSHV QNYSSTRTSS HLDPISNYEV KELTWENGQL 60 AMHGLGGLLP SGPTKPTWGF RTGDTLESIV RQATCHKQDP YVTTYHGKTP ATISSNIVAS 120 SGGKQAENSG RPTLATSVMK KRNRSINSDY DGKNFSSNCS IQEEQGGPSA CASASATFCR 180 ESDTTMMTWA SFESPQSLKN KSTDEDSACA DGLENQDEDR EAKGESGRSN STRRSRTAAI 240 HNQSERRRRD RINQKMKALQ KLVPNASKTD KASMLDEVIE YLKQLQAQVQ LMSSVRNMSP 300 QMVMPLGMQQ QLQMSMLARM GMGVGVGMGM GMLDMSSMAR ATPQSFPTLI HPAAASPTFV 360 PPQFMVQPMI PAQAAKPGPT GTSSSSVPLP DPYCALLAQS MNMELYNKMA AFYTQQVNQA 420 RQAASSPSLS SHVQD

Sequence ? help Back to Top

Protein Sequence Length: 435 aa Download sequence

MSHCVVPSWN LRHQRQEQVE GEEGNRSSHV QNYSSTRTSS HLDPISNYEV KELTWENGQL  60
AMHGLGGLLP SGPTKPTWGF RTGDTLESIV RQATCHKQDP YVTTYHGKTP ATISSNIVAS  120
SGGKQAENSG RPTLATSVMK KRNRSINSDY DGKNFSSNCS IQEEQGGPSA CASASATFCR  180
ESDTTMMTWA SFESPQSLKN KSTDEDSACA DGLENQDEDR EAKGESGRSN STRRSRTAAI  240
HNQSERRRRD RINQKMKALQ KLVPNASKTD KASMLDEVIE YLKQLQAQVQ LMSSVRNMSP  300
QMVMPLGMQQ QLQMSMLARM GMGVGVGMGM GMLDMSSMAR ATPQSFPTLI HPAAASPTFV  360
PPQFMVQPMI PAQAAKPGPT GTSSSSVPLP DPYCALLAQS MNMELYNKMA AFYTQQVNQA  420
RQAASSPSLS SHVQD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	245	250	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00050.1	2e-41	bHLH family protein