PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON69467.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

WRKY

Protein Properties

Length: 388aa MW: 43256.3 Da PI: 6.9

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON69467.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	105.3	3.3e-33	237	294	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s++prsYYrCt+++C+vkk+vers +dp++v++tYeg+Hnh+ PON69467.1 237 EDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCTVKKRVERSFQDPSIVITTYEGQHNHH 294 8********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MSNDQERSDQ HRHHDPYRSY DPFSYEIDGR ACSLFPFLNH SSSIMYNRST AVLAQQNVQS 60 AEAAATNNST NSSLDPTMNS YLMSYTDCLQ GSMDQYNNLS RAFDISCAAS SSDIVSQIID 120 HSNHDIDSTT NNNNNLVTNP MNAGAADQSA GTSENPSTPN SSISASSSNE AAAVGMEDSG 180 KSKKEDDDVK QPKGSDDQDG DEDKASKKVS SKTKKKEKRP REPRFAFLTK SEIDHLEDGY 240 RWRKYGQKAV KNSPYPRSYY RCTTQKCTVK KRVERSFQDP SIVITTYEGQ HNHHCPATLR 300 GNAAAMLSPS LLASAASVGT PNLHHEFFTQ LLPINNTNHH LHYSNHPGEP RSILYSNLTH 360 QYRQQLQVPD FGLLQDLVPA FSRHKQDP

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MSNDQERSDQ HRHHDPYRSY DPFSYEIDGR ACSLFPFLNH SSSIMYNRST AVLAQQNVQS  60
AEAAATNNST NSSLDPTMNS YLMSYTDCLQ GSMDQYNNLS RAFDISCAAS SSDIVSQIID  120
HSNHDIDSTT NNNNNLVTNP MNAGAADQSA GTSENPSTPN SSISASSSNE AAAVGMEDSG  180
KSKKEDDDVK QPKGSDDQDG DEDKASKKVS SKTKKKEKRP REPRFAFLTK SEIDHLEDGY  240
RWRKYGQKAV KNSPYPRSYY RCTTQKCTVK KRVERSFQDP SIVITTYEGQ HNHHCPATLR  300
GNAAAMLSPS LLASAASVGT PNLHHEFFTQ LLPINNTNHH LHYSNHPGEP RSILYSNLTH  360
QYRQQLQVPD FGLLQDLVPA FSRHKQDP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G29860.1	2e-49	WRKY family protein