PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON69561.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 515aa MW: 56838.4 Da PI: 7.6053

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON69561.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.8	2.4e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l+++++++G g+W+++++ g+ R++k+c++rw +yl PON69561.1 14 KGLWSPEEDEKLLNYITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP
2	Myb_DNA-binding	44.7	3.1e-14	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E+ l++++++ lG++ W+ Ia+ ++ gRt++++k+ w++ PON69561.1 67 RGPFSQQEENLIIELHAVLGNR-WSQIAAQLP-GRTDNEIKNLWNS 110 89******************.*****.*******9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 515 aa Download sequence
MGRHSCCYKQ KLRKGLWSPE EDEKLLNYIT KHGHGCWSSV PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGPF SQQEENLIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CIKKKLRQKG 120 IDPNTHKPLS EVENDITKLE KASSMANKAG NNNNNNENNN NIGSSSNDPP HHHHHQLNLT 180 EAQPSSIAVD RYPLLEVSSC ANPNIMNHNL SASAAAVPPP TQEFFLEKSD IVSNTTSGCR 240 PSDLASYFSF HHSNNYRTSS SHDHHNNTAS FRFNMSQNSS TTRHHHHHHH DHHQMMNSLI 300 PPVSSCSIFS SSSSSTSTSS SSPSINPRVK PSISLPLSDH QNPPTVSCEV NNNGVQIWEA 360 STFSNNGSSS TSSNIELQSQ GNNNFFENSN TTPPATTTTS TTTTPNAANF STWGGLVPES 420 GALKSDHDPE DIKWSEYLHS PFLLGASNNS QNSSQPILYS NIVKPETHGH LVLTSTTGST 480 SSSWHQSELV QAASSEIMYT NKDLQRLAVA FGQTL

Sequence ? help Back to Top

Protein Sequence Length: 515 aa Download sequence

MGRHSCCYKQ KLRKGLWSPE EDEKLLNYIT KHGHGCWSSV PKLAGLQRCG KSCRLRWINY  60
LRPDLKRGPF SQQEENLIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CIKKKLRQKG  120
IDPNTHKPLS EVENDITKLE KASSMANKAG NNNNNNENNN NIGSSSNDPP HHHHHQLNLT  180
EAQPSSIAVD RYPLLEVSSC ANPNIMNHNL SASAAAVPPP TQEFFLEKSD IVSNTTSGCR  240
PSDLASYFSF HHSNNYRTSS SHDHHNNTAS FRFNMSQNSS TTRHHHHHHH DHHQMMNSLI  300
PPVSSCSIFS SSSSSTSTSS SSPSINPRVK PSISLPLSDH QNPPTVSCEV NNNGVQIWEA  360
STFSNNGSSS TSSNIELQSQ GNNNFFENSN TTPPATTTTS TTTTPNAANF STWGGLVPES  420
GALKSDHDPE DIKWSEYLHS PFLLGASNNS QNSSQPILYS NIVKPETHGH LVLTSTTGST  480
SSSWHQSELV QAASSEIMYT NKDLQRLAVA FGQTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G57560.1	1e-87	MYB family protein