PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON69574.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family M-type_MADS
Protein Properties Length: 257aa    MW: 29286.5 Da    PI: 10.6304
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON69574.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF57.12.3e-181151343
                --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TT CS
      SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsst 43
                i+n+s r+ tf kR++g++KK +ELS+LCd++++ ii+s+ 
  PON69574.1 11 ISNDSARKATFKKRKKGMMKKVSELSTLCDIDACAIIYSPY 51
                9**************************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MTRKKVKLAY ISNDSARKAT FKKRKKGMMK KVSELSTLCD IDACAIIYSP YDTQPEVFPS  60
VAGVHRVLAK FRRMPEMEQS KKMVNQEGFL RQRISKAGEQ LKKQRKENRE KEMTRVMFHN  120
LTGKMGLQGL SVMDLNDLTW MIDHHLKDIH KRMETIAKNK RSVRMAAAVD TGKQKRGGGE  180
SSHAAAAAMN VENTNNGMQR QQQWLMGLMN PHQQDHDKSN SSNNNNNNSH GQHMGFGGDE  240
MIMPFGDNNN WSNGFFP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1325RKKVKLAYISNDSARKATFKKRK
22226KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.18e-62M-type_MADS family protein