PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON69922.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family C3H
Protein Properties Length: 438aa    MW: 47887.1 Da    PI: 7.9149
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON69922.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH29.71.1e-09113134426
                 ---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   4 elCrffartGtCkyGdrCkFaHg 26 
                 + C+++ + G C+yGd+CkF+H+
  PON69922.1 113 KVCNYWIQ-GNCSYGDKCKFIHS 134
                 68******.*************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 438 aa     Download sequence    
MDVEGGGSKR VFQRLTGPSS GDPKHQKVCY HWRAGKCNRF PCPYLHRELQ PPPPNGTASS  60
KRHHAFAASA ATDDHHSGPR RGPNNNNNNN NNNTWGRVHG NAGGNKFIRK TEKVCNYWIQ  120
GNCSYGDKCK FIHSWSLGDS FSLLTQLEGH QKVVSGIALP SGSDKLYTGS QDETVRIWDC  180
QSGQCAAMIK LGSQVGCMIS EGPWIFVGIL NMVKAWNTQT TMELSLSGPV GQVYSLVVGN  240
ELLFAGTQDG AILAWKFNAA ANCFEPVTSL KGHSLPVISL VVGANRLYSG SMDNSIKVWS  300
LETLQCLQTM TEHNSVVMSV LCWDQFLLSC SIDQTIKVWV ATQNGGLEVT YTHNEEHGVL  360
ALCGMHDSEG KPVLLCSCND NTVRLYDLPS FSERGKIFSK QEVRSIQVGP GGLFFTGDGT  420
GQVRVWKWNT LAEPASTA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25440.10.0C3H family protein