PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON69937.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

TCP

Protein Properties

Length: 374aa MW: 38787.6 Da PI: 6.5478

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON69937.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	111.8	9.9e-35	81	150	4	73
TCP 4 kkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec 73 k++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti WLl+ a+pai+e+tgt++ +a ++ PON69937.1 81 VKRKSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGLKSDGETIRWLLEHAEPAIIEATGTGTVPAIAV 150 5899**********************************************************88777443 PP

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence
MEENDEEQSN NTNDMSASEA SIVEPPPPPP PAAAAAETGP SLTILMKEEF TDTERELSER 60 SLSMGLIKVP LSTTSSGAVA VKRKSKDRHT KVEGRGRRIR MPATCAARIF QLTRELGLKS 120 DGETIRWLLE HAEPAIIEAT GTGTVPAIAV SVGGTLKIPT TTTARPNGEI TEVVPRKRRR 180 RASNNEFIDV NDQVSVSSGL APIAPMASGG AGNGTGVGNV AQGLVPLWPV GPNNSAAGPF 240 LMFPNSGAVP GVANQAQLWA IQAGAGVRTP FFGVQARPIS NFVSALQPVQ LEDPQVSSGS 300 VSSGAATTTG SGGSCSSTLG PTLGSGTTCS TVVTSGGGTG STTTTQMLRD FSLEIYDKKE 360 LQFMGRSQTQ CPKP

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence

MEENDEEQSN NTNDMSASEA SIVEPPPPPP PAAAAAETGP SLTILMKEEF TDTERELSER  60
SLSMGLIKVP LSTTSSGAVA VKRKSKDRHT KVEGRGRRIR MPATCAARIF QLTRELGLKS  120
DGETIRWLLE HAEPAIIEAT GTGTVPAIAV SVGGTLKIPT TTTARPNGEI TEVVPRKRRR  180
RASNNEFIDV NDQVSVSSGL APIAPMASGG AGNGTGVGNV AQGLVPLWPV GPNNSAAGPF  240
LMFPNSGAVP GVANQAQLWA IQAGAGVRTP FFGVQARPIS NFVSALQPVQ LEDPQVSSGS  300
VSSGAATTTG SGGSCSSTLG PTLGSGTTCS TVVTSGGGTG STTTTQMLRD FSLEIYDKKE  360
LQFMGRSQTQ CPKP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	176	180	RKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51910.2	1e-62	TCP family protein