PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON69969.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family bHLH
Protein Properties Length: 244aa    MW: 27869.9 Da    PI: 8.9179
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON69969.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.21.9e-1067117153
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53 
                 r++ h e+Er+RR+++ + f  Lr+llP  +   ++K s  +   +Av+YI  
  PON69969.1  67 RKVIHREIERQRRQEMTNLFVSLRSLLPLEF--IKGKRSIPDHMNEAVRYIIL 117
                 6788*************************65..******************65 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MFPIREGSDQ LSSTYISFNP NENLLISEDL IQSQVSTDDV RNGINTTGKG RRRKLTDQKS  60
ALHNEKRKVI HREIERQRRQ EMTNLFVSLR SLLPLEFIKG KRSIPDHMNE AVRYIILLKK  120
KIEELEGRRN EKLFNLSKPD GSEVFGNSKS FPPSFFTISP SCGGIEIVIS SSYTESDGAL  180
PVSRVMKVLL EQGLRIFSCI STKVNTNMIV HTIQSEVCDF TCIDQNELQQ RLSEVNLSLR  240
YTTL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16679KRKVIHREIERQRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25410.15e-25bHLH family protein