PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON70185.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 279aa    MW: 30893.1 Da    PI: 5.211
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON70185.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.83.2e-19135185356
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                 ++GVr+++ +g+++AeIrdp++ng  kr++lg++ t+e+A  a+++a+ k++g+
  PON70185.1 135 FRGVRRRP-WGKYAAEIRDPKKNG--KRVWLGTYETPEDAGLAYDRAAFKIRGA 185
                 8*******.***********9998..*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MSGSSVLMSS SDESADFALL EAISQHLLRD DRFDDLSTPF NPSMYSQTSS SFSNLFLAAT  60
ANNDHQSCWM TTTHDFPAFK GDDTDDTSFV FGANPGWSSP DEGSTDDFVE EAVEDQPVMA  120
ARVSNAPTSK GKMSFRGVRR RPWGKYAAEI RDPKKNGKRV WLGTYETPED AGLAYDRAAF  180
KIRGAKAKLN FPHLIGSETW EPIRITPKRR SPQPSSPSSS FENGSPSRKR RHRVGSPEST  240
SVESGANEVF RVIDQLGFGD DWLWNDLGSK PLEFLSFGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.13e-44ERF family protein