PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON70297.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family M-type_MADS
Protein Properties Length: 49aa    MW: 5933.81 Da    PI: 10.8223
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON70297.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF275.7e-091135730
                HHHHHHHHHHHHHHH.HHHHHHHHH CS
      SRF-TF  7 snrqvtfskRrngil.KKAeELSvL 30
                sn  v+fskRr+g++ K A EL+++
  PON70297.1 11 SNIFVSFSKRRKGLFqKRATELCTM 35
                7778***********666*****95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 49 aa     Download sequence    
MEEQQKQAQA SNIFVSFSKR RKGLFQKRAT ELCTMFCGSD RHRHFIYHR