PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON70336.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family NAC
Protein Properties Length: 213aa    MW: 24813.7 Da    PI: 7.4937
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON70336.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM63.46.8e-2075165286
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratk..sgyWkat 86 
                 p+G+rF Pt+eelv++yLk+++ +k+    +++ + i+e ++y+  P++L   ++  ++++w+fF++++k +++++ k+r++    g+Wk+ 
  PON70336.1  75 PMGYRFAPTEEELVTFYLKNRIFDKElnpvTDI-KDIDEEELYSKPPKELVrFNYGDDKRQWFFFVNNHKDNNNSQAKERTVGkeLGFWKKI 165
                 89***********************97542222.3488999*********8456666778********************754347****85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MRDQSNWKAT KSTSDQKVLP EKSSEDQSNW KAILRNSSEY VLPEKSSEWV LPEESSEDQS  60
RNKSSIEWVL PENIPMGYRF APTEEELVTF YLKNRIFDKE LNPVTDIKDI DEEELYSKPP  120
KELVRFNYGD DKRQWFFFVN NHKDNNNSQA KERTVGKELG FWKKIFGGQE NSLGNGGISN  180
KGKFQGAKNI GQNEKRKRLP KLLVIGITYY YGE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.17e-12NAC family protein