PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON70344.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family NAC
Protein Properties Length: 152aa    MW: 18000.6 Da    PI: 10.5292
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON70344.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM36.81.1e-117912189128
         NAM  89 dkevlsk...kgelvglkktLvfykgrapkgektdWvmheyrl 128
                  k++++    +++ +g k+ +v+ykg+a++g+kt+Wvm+eyr+
  PON70344.1  79 RKDIVKGlvrGKHIIGYKTRFVYYKGEAKHGTKTNWVMDEYRV 121
                 45555545548889***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 152 aa     Download sequence    
MESEMYKFQL DRNRREGNYF SRKAGEGYWK FHGSEPIIMD ETTATIRHVK HTEGLGPFSS  60
TIRYVRLMTK GHCNGRPHRK DIVKGLVRGK HIIGYKTRFV YYKGEAKHGT KTNWVMDEYR  120
VNENYLPNSN KMENLVLCKI YRNRKRKGST SF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39610.12e-11NAC family protein