PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON70962.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

Protein Properties

Length: 843aa MW: 92594.1 Da PI: 6.9624

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON70962.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	58.3	1.4e-18	296	395	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+k l+ sd+++ grlvlpkk+ae++ ++++e+ l+++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++ + e++lv++ PON70962.1 296 FEKMLSASDAGRIGRLVLPKKCAEAYfpPISQPEGLPLKVQDAKGKEWIFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRLE-PEGKLVMG 392 89************************555566778***********99899999999.*******************766.77777777 PP EE- CS B3 96 vfr 98 +++ PON70962.1 393 FRK 395 776 PP

Sequence ? help Back to Top
Protein Sequence Length: 843 aa Download sequence
SAFEEGRFCE IFHKNASGWR CCESCGKRIH CGCIVSIHAF TLLDPGGIEC IPCARKSVFL 60 TSNPTWANSL LFPTPTAERL KELSVKNWNQ LAGSGPVPWR QAPSLFSSSI TSSELHPRVP 120 YEVDISSALN KLSCAERIPV SSLEQRKIED LSERLHNGSL KLGAHEILEN GTAGKNCEEH 180 ISSCLSMSQQ SSSLKEDPST PQFGLTVPYT TTNETSDQFG VSGTNLRPTP PSLSKQFIGN 240 LQNGVDSSAD TQIRNARPRA DARGRNQLLP RYWPRFTDQE LQQISGDSNS VITPLFEKML 300 SASDAGRIGR LVLPKKCAEA YFPPISQPEG LPLKVQDAKG KEWIFQFRFW PNNNSRMYVL 360 EGVTPCIQSM QLQAGDTVTF SRLEPEGKLV MGFRKASVVP PSDQENETNK NGNGVSARGD 420 AELADPSSWS KVDKSGYIAK EVLGAKALIS RKRKSSTLGS KSKRLRIENE DMMELKLTWE 480 EAQGLLRPPS NHVPSVVVIE GFEFEEYEDA PVLGKPTIFA TNNGEKVQWA QCENCFKLRK 540 LPADALVPST WTCSDNSWDP QRSSCSVSQE LPSEELEDLL PQNVSVASKK MKAAKQDMEN 600 VEALEGLDTL ANLAILGEGD SLPASAQATT KHPRHRPGCS CIVCIQPPSG KGPKHKPSCT 660 CNVCLTVKRR FRTLMMRREK KQSEKEAETT RKKQQQQQPL PEQLHDDTVV NNDAGNSPKR 720 NIDVHEISDD DPSKMKSSTS PFKGQIDLNI QPEREEELSP GSDSGGMMKL LQDATERYLR 780 QQRLSSSGCS ENLSGNVLRR DGGQAAGEKP SNVVNLGSNN HNADEDSPAT LTVKASVSST 840 AAG

Sequence ? help Back to Top

Protein Sequence Length: 843 aa Download sequence

SAFEEGRFCE IFHKNASGWR CCESCGKRIH CGCIVSIHAF TLLDPGGIEC IPCARKSVFL  60
TSNPTWANSL LFPTPTAERL KELSVKNWNQ LAGSGPVPWR QAPSLFSSSI TSSELHPRVP  120
YEVDISSALN KLSCAERIPV SSLEQRKIED LSERLHNGSL KLGAHEILEN GTAGKNCEEH  180
ISSCLSMSQQ SSSLKEDPST PQFGLTVPYT TTNETSDQFG VSGTNLRPTP PSLSKQFIGN  240
LQNGVDSSAD TQIRNARPRA DARGRNQLLP RYWPRFTDQE LQQISGDSNS VITPLFEKML  300
SASDAGRIGR LVLPKKCAEA YFPPISQPEG LPLKVQDAKG KEWIFQFRFW PNNNSRMYVL  360
EGVTPCIQSM QLQAGDTVTF SRLEPEGKLV MGFRKASVVP PSDQENETNK NGNGVSARGD  420
AELADPSSWS KVDKSGYIAK EVLGAKALIS RKRKSSTLGS KSKRLRIENE DMMELKLTWE  480
EAQGLLRPPS NHVPSVVVIE GFEFEEYEDA PVLGKPTIFA TNNGEKVQWA QCENCFKLRK  540
LPADALVPST WTCSDNSWDP QRSSCSVSQE LPSEELEDLL PQNVSVASKK MKAAKQDMEN  600
VEALEGLDTL ANLAILGEGD SLPASAQATT KHPRHRPGCS CIVCIQPPSG KGPKHKPSCT  660
CNVCLTVKRR FRTLMMRREK KQSEKEAETT RKKQQQQQPL PEQLHDDTVV NNDAGNSPKR  720
NIDVHEISDD DPSKMKSSTS PFKGQIDLNI QPEREEELSP GSDSGGMMKL LQDATERYLR  780
QQRLSSSGCS ENLSGNVLRR DGGQAAGEKP SNVVNLGSNN HNADEDSPAT LTVKASVSST  840
AAG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	450	455	SRKRKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	1e-149	B3 family protein