PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON71190.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family GeBP
Protein Properties Length: 209aa    MW: 24038.5 Da    PI: 10.6855
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON71190.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57354.33.8e-1722113298
      DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWgs 98 
                 +f+ l++e+De +lL+ +++  ++   s+s  ++     ++ s+ +++s+sq+++K+rrL+ K++++ ++     +  ++++hd k +++++kiWg+
  PON71190.1  22 RFRLLFTESDETLLLKTFLKVSKHSSPSSSTITSPNLARIRTSLGLRFSHSQIIDKLRRLRLKYHRQART-----KSLIKTPHDLKLYNIARKIWGK 113
                 57889****************99999999999*********************************99998.....6789****************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MSTLNAKTKL PSSPSEPSSD ARFRLLFTES DETLLLKTFL KVSKHSSPSS STITSPNLAR  60
IRTSLGLRFS HSQIIDKLRR LRLKYHRQAR TKSLIKTPHD LKLYNIARKI WGKKTQHKRL  120
RHAKKEEEEP QTSGGSEGFR AESEEFSREN DEVLEKGSVC LDEEKVRSVR ERWMVLRMEE  180
AELMAQKAEL VKEQLKLVIQ AFRSSSGTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28040.12e-10GeBP family protein