PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON71294.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

TALE

Protein Properties

Length: 478aa MW: 53045.8 Da PI: 6.6391

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON71294.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.2	1.2e-07	402	435	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp++e++++L +++gL+ +q+ +WF N+R + PON71294.1 402 KWPYPTEEDKARLVQETGLQLKQINNWFINQRKR 435 469*****************************87 PP
2	ELK	28.6	3.2e-10	356	377	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++++++++E++ PON71294.1 356 ELKHELKQGYKEKIVDIREEIL 377 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 478 aa Download sequence
MAYHNHLSSQ DLPLHHHHHF GDQSQQQQQN HTILPDQLAI AHSSPDPTSK SVQTAASAPN 60 WLNSALLRTQ PHAHFADNTN GNSHVSNSNN NTNFLNLHTA SDSANSGQAS NQWLSRPILQ 120 RNHSDVIDDV AAAAAAAAAA GESMIGGAMS HDSAAEMKAA TAANGQNNLN KSEGVVVESG 180 GDGGVINWQN ARYKAEILSH PFYDQLLSAH VACLRIATPV DQLPRIDAQL AQSQNVVAKY 240 SALGQGLVVD DKELDQFMTH YVLLLCSFKE QLQQHVRVHA MEAVMACWEI EQSLQSLTGV 300 SPGEGTGATM SDDDDDQVDS DANLFDGSLD GPDSMGFGPL IPTESERSLM ERVRQELKHE 360 LKQGYKEKIV DIREEILRKR RAGKLPGDTT SVLKAWWQSH SKWPYPTEED KARLVQETGL 420 QLKQINNWFI NQRKRNWHSN PSTSTVLKSK RKRYSLHNQF KFQTNTMHFS RLVDLHFS

Sequence ? help Back to Top

Protein Sequence Length: 478 aa Download sequence

MAYHNHLSSQ DLPLHHHHHF GDQSQQQQQN HTILPDQLAI AHSSPDPTSK SVQTAASAPN  60
WLNSALLRTQ PHAHFADNTN GNSHVSNSNN NTNFLNLHTA SDSANSGQAS NQWLSRPILQ  120
RNHSDVIDDV AAAAAAAAAA GESMIGGAMS HDSAAEMKAA TAANGQNNLN KSEGVVVESG  180
GDGGVINWQN ARYKAEILSH PFYDQLLSAH VACLRIATPV DQLPRIDAQL AQSQNVVAKY  240
SALGQGLVVD DKELDQFMTH YVLLLCSFKE QLQQHVRVHA MEAVMACWEI EQSLQSLTGV  300
SPGEGTGATM SDDDDDQVDS DANLFDGSLD GPDSMGFGPL IPTESERSLM ERVRQELKHE  360
LKQGYKEKIV DIREEILRKR RAGKLPGDTT SVLKAWWQSH SKWPYPTEED KARLVQETGL  420
QLKQINNWFI NQRKRNWHSN PSTSTVLKSK RKRYSLHNQF KFQTNTMHFS RLVDLHFS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	433	453	RKRNWHSNPSTSTVLKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.2	0.0	TALE family protein