PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON71395.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

MYB

Protein Properties

Length: 251aa MW: 27535.6 Da PI: 8.4814

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON71395.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.9	5.3e-19	42	87	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W+teEd +l ++v+++G+++W++I+r++ gR++k+c++rw + PON71395.1 42 KGPWSTEEDRILTRLVERYGPRNWSLISRYIK-GRSGKSCRLRWCNQ 87 79***************************9.*********985 PP
2	Myb_DNA-binding	54	3.8e-17	96	138	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++++ Ede ++ a++++G++ W+tIar ++ gRt++ +k++w++ PON71395.1 96 PFSAAEDETILAAHARYGNR-WATIARLLP-GRTDNAVKNHWNST 138 79****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 251 aa Download sequence
MEPMNYNRCS STTTSSSDSS SSESSGNDIK VPRSGTKPER IKGPWSTEED RILTRLVERY 60 GPRNWSLISR YIKGRSGKSC RLRWCNQLSP SVEHRPFSAA EDETILAAHA RYGNRWATIA 120 RLLPGRTDNA VKNHWNSTLK RRVREQQMGM EEMDGSACGT AAFGGGPAGS VPCGINNDSN 180 INNGIGISVN NGSPPLSLED DPLTALTLAP PGIGGETVAE RRTESFPAGF WDVMRDVIAR 240 EVREYVNSGF R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	6e-58	MYB family protein